<?xml version="1.0" encoding="UTF-8"?><?xml-stylesheet type="text/xsl" href="static/style.xsl"?><OAI-PMH xmlns="http://www.openarchives.org/OAI/2.0/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.openarchives.org/OAI/2.0/ http://www.openarchives.org/OAI/2.0/OAI-PMH.xsd"><responseDate>2026-09-23T20:50:20Z</responseDate><request verb="GetRecord" identifier="oai:www.repository.cam.ac.uk:1810/381956" metadataPrefix="uketd_dc">https://api.repository.cam.ac.uk/server/oai/request</request><GetRecord><record><header><identifier>oai:www.repository.cam.ac.uk:1810/381956</identifier><datestamp>2026-03-14T01:41:59Z</datestamp><setSpec>com_1810_221811</setSpec><setSpec>com_1810_256062</setSpec><setSpec>col_1810_221812</setSpec></header><metadata><uketd_dc:uketddc xmlns:uketd_dc="http://naca.central.cranfield.ac.uk/ethos-oai/2.0/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:uketdterms="http://naca.central.cranfield.ac.uk/ethos-oai/terms/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:doc="http://www.lyncode.com/xoai" xsi:schemaLocation="http://naca.central.cranfield.ac.uk/ethos-oai/2.0/ http://naca.central.cranfield.ac.uk/ethos-oai/2.0/uketd_dc.xsd">
   <dc:title>Piezo1-dependent mechanical regulation of chemical signalling in the developing Xenopus laevis brain</dc:title>
   <dc:identifier xsi:type="dcterms:DOI">https://doi.org/10.17863/CAM.116962</dc:identifier>
   <dc:creator>Mukherjee, Sudipta</dc:creator>
   <uketdterms:advisor>Franze, kristian</uketdterms:advisor>
   <uketdterms:advisor>Adams, Richard</uketdterms:advisor>
   <dcterms:abstract>During brain development, neurons extend axons to distant regions. These axons are guided
towards their correct targets by various chemo-mechanical signals. Major chemical signals
include semaphorins, slits, netrins and ephrins/Eph, whereas mechanical signals include
tissue stiffness, viscosity and cellular forces. In the developing embryo, chemical and
mechanical signals are not isolated. However, how cells integrate these two different types
of signals remains poorly understood. Here, I investigated how tissue stiffness and longrange
chemical guidance cues interact, using the developing Xenopus laevis forebrain as a
model system.
First, I adapted hybridisation chain reaction RNA fluorescence in situ hybridisation (HCR
RNA-FISH) to Xenopus laevis brains. I then probed the expression of different chemical
cues upon knockdown of the mechanosensitive ion channel Piezo1, which transduces
mechanical signals into intracellular chemical signals. Piezo1 downregulation led to a
decrease in both semaphorin 3A (sema3A) and slit1 expression.
Piezo1 depletion not only altered the chemical landscape of the developing brain, but also
its mechanical properties. To understand how Piezo1 regulates tissue stiffness, I investigated
microtubule acetylation, single cell stiffness and cell adhesions. Microtubule acetylation and
single cell stiffness were Piezo1-independent. However, the expression of adhesion
molecules NCAM1 and N-cadherin were highly decreased upon Piezo1 downregulation.
Knocking down both NCAM1 and N-cadherin decreased tissue stiffness and reduced both
sema3A and Piezo1 expression, suggesting mutual regulation of cell-cell adhesions and
Piezo1. To investigate if mechanical cues are sufficient to alter chemical signalling cues, I modulated
stiffness in vitro and in vivo. Culturing soft parts of the brain, which normally do not produce
sema3A or slit1, in stiff hydrogel substrates increased sema3A and slit1 expression,
demonstrating that the expression of chemical cues is regulated by substrate stiffness.
Compression stiffening soft parts of the brain in vivo increased sema3A but not slit1
expression. Stiffening Piezo1 knockdown brains, however, did not increase sema3A
expression, suggesting compression stiffened sema3A upregulation is Piezo1-dependent. 
My findings suggest that cell-cell adhesions and tissue mechanics mutually regulate each
other and tissue mechanics in turn regulates the transcription of chemical cues. Due to the
conserved nature of the molecules involved, this dynamic and complex crosstalk between
chemical and mechanical signalling might underlie many developmental and disease-related
phenomena across various species.</dcterms:abstract>
   <uketdterms:institution>University of Cambridge</uketdterms:institution>
   <dcterms:issued>2024-09-29</dcterms:issued>
   <dc:type>Thesis</dc:type>
   <uketdterms:qualificationlevel>Doctoral</uketdterms:qualificationlevel>
   <uketdterms:qualificationname>Doctor of Philosophy (PhD)</uketdterms:qualificationname>
   <dc:language>eng</dc:language>
   <uketdterms:sponsor>Wellcome trust PhD Studentship (222280/Z/20/Z) and Cambridge Trust.</uketdterms:sponsor>
   <dcterms:isReferencedBy xsi:type="dcterms:URI">https://www.repository.cam.ac.uk/handle/1810/381956</dcterms:isReferencedBy>
   <uketdterms:embargotype>embargo</uketdterms:embargotype>
   <uketdterms:embargodate>2031-03-26</uketdterms:embargodate>
   <dcterms:license>https://www.repository.cam.ac.uk/bitstreams/cd37db5c-ab2a-47c5-bdb4-42387f39570d/download</dcterms:license>
   <uketdterms:checksum xsi:type="uketdterms:MD5">87eda9de84448d1f82354d60eee3eb5f</uketdterms:checksum>
   <dc:identifier xsi:type="dcterms:URI">https://www.repository.cam.ac.uk/bitstreams/689f31d1-89b5-4a80-974d-ec7b4674dab1/download</dc:identifier>
   <uketdterms:checksum xsi:type="uketdterms:MD5">f1e6c1f40221628bececea7ccf3a94d9</uketdterms:checksum>
   <dc:rights>http://purl.org/NET/rdflicense/allrightsreserved</dc:rights>
   <dc:subject>axon pathfinding</dc:subject>
   <dc:subject>mechanobiology</dc:subject>
   <dc:subject>mechanotransduction</dc:subject>
   <dc:subject>neuronal guidance</dc:subject>
</uketd_dc:uketddc>
</metadata></record></GetRecord></OAI-PMH>